1// Copyright 2016 Google Inc. 2// 3// Licensed under the Apache License, Version 2.0 (the "License"); 4// you may not use this file except in compliance with the License. 5// You may obtain a copy of the License at 6// 7// http://www.apache.org/licenses/LICENSE-2.0 8// 9// Unless required by applicable law or agreed to in writing, software 10// distributed under the License is distributed on an "AS IS" BASIS, 11// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. 12// See the License for the specific language governing permissions and 13// limitations under the License. 14 15syntax = "proto3"; 16 17package google.genomics.v1; 18 19import "google/api/annotations.proto"; 20 21option cc_enable_arenas = true; 22option go_package = "google.golang.org/genproto/googleapis/genomics/v1;genomics"; 23option java_multiple_files = true; 24option java_outer_classname = "PositionProto"; 25option java_package = "com.google.genomics.v1"; 26 27// An abstraction for referring to a genomic position, in relation to some 28// already known reference. For now, represents a genomic position as a 29// reference name, a base number on that reference (0-based), and a 30// determination of forward or reverse strand. 31message Position { 32 // The name of the reference in whatever reference set is being used. 33 string reference_name = 1; 34 35 // The 0-based offset from the start of the forward strand for that reference. 36 int64 position = 2; 37 38 // Whether this position is on the reverse strand, as opposed to the forward 39 // strand. 40 bool reverse_strand = 3; 41} 42